Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.78□□□□□ -0.36
Gabpb1Q00420 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.78□□□□□ -0.36
Gabpb1Q00420 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
Gabpb1Q00420 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Gabpb1Q00420 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gabpb1Q00420 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.77□□□□□ -0.36
Gabpb1Q00420 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gabpb1Q00420 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gabpb1Q00420 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.77□□□□□ -0.37
Gabpb1Q00420 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gm45930-201ENSMUST00000221330 292 ntBASIC12.77□□□□□ -0.37
Gabpb1Q00420 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.77□□□□□ -0.37
Gabpb1Q00420 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.77□□□□□ -0.37
Gabpb1Q00420 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.77□□□□□ -0.37
Gabpb1Q00420 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gabpb1Q00420 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Gm11591-201ENSMUST00000120063 702 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 Gm12502-201ENSMUST00000120197 444 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 Gm25927-201ENSMUST00000175058 117 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Snora73a-201ENSMUST00000082453 205 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.76□□□□□ -0.37
Gabpb1Q00420 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms