Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Scn1bP97952 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Scn1bP97952 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scn1bP97952 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.5□□□□□ -0.57
Scn1bP97952 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.5□□□□□ -0.57
Scn1bP97952 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.5□□□□□ -0.57
Scn1bP97952 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Gm8227-201ENSMUST00000223306 571 ntBASIC11.5□□□□□ -0.57
Scn1bP97952 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.5□□□□□ -0.57
Scn1bP97952 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.5□□□□□ -0.57
Scn1bP97952 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.5□□□□□ -0.57
Scn1bP97952 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Scn1bP97952 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scn1bP97952 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.49□□□□□ -0.57
Scn1bP97952 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.49□□□□□ -0.57
Scn1bP97952 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Scn1bP97952 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Scn1bP97952 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Scn1bP97952 Gm13453-201ENSMUST00000118708 357 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Scn1bP97952 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.49□□□□□ -0.57
Scn1bP97952 Gm10766-202ENSMUST00000194123 606 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Scn1bP97952 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.49□□□□□ -0.57
Scn1bP97952 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.49□□□□□ -0.57
Scn1bP97952 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.49□□□□□ -0.57
Scn1bP97952 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms