Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.78□□□□□ -0.68
Smn1P97801 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.77□□□□□ -0.68
Smn1P97801 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.77□□□□□ -0.68
Smn1P97801 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Smn1P97801 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Smn1P97801 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smn1P97801 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Smn1P97801 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.77□□□□□ -0.69
Smn1P97801 Gm5687-201ENSMUST00000118252 640 ntBASIC10.77□□□□□ -0.69
Smn1P97801 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.77□□□□□ -0.69
Smn1P97801 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Smn1P97801 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.77□□□□□ -0.69
Smn1P97801 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Gm28693-202ENSMUST00000190758 331 ntBASIC10.77□□□□□ -0.69
Smn1P97801 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.77□□□□□ -0.69
Smn1P97801 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.77□□□□□ -0.69
Smn1P97801 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.77□□□□□ -0.69
Smn1P97801 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.77□□□□□ -0.69
Smn1P97801 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.77□□□□□ -0.69
Smn1P97801 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Smn1P97801 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Smn1P97801 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.77□□□□□ -0.69
Smn1P97801 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smn1P97801 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Smn1P97801 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Smn1P97801 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smn1P97801 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.76□□□□□ -0.69
Smn1P97801 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.76□□□□□ -0.69
Smn1P97801 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.76□□□□□ -0.69
Smn1P97801 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smn1P97801 Gm6218-201ENSMUST00000219812 628 ntBASIC10.76□□□□□ -0.69
Smn1P97801 Gm19220-201ENSMUST00000222682 803 ntBASIC10.76□□□□□ -0.69
Smn1P97801 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Gm16372-201ENSMUST00000073088 450 ntBASIC10.76□□□□□ -0.69
Smn1P97801 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.76□□□□□ -0.69
Smn1P97801 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.76□□□□□ -0.69
Smn1P97801 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.76□□□□□ -0.69
Smn1P97801 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smn1P97801 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Smn1P97801 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms