Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Gm34023-201ENSMUST00000195539 217 ntBASIC11.63□□□□□ -0.55
Cacna1aP97445 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Mir339-201ENSMUST00000083659 96 ntBASIC11.63□□□□□ -0.55
Cacna1aP97445 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cacna1aP97445 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cacna1aP97445 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cacna1aP97445 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm43778-201ENSMUST00000199438 199 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm45856-201ENSMUST00000212752 416 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cacna1aP97445 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cacna1aP97445 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.62□□□□□ -0.55
Cacna1aP97445 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm12165-201ENSMUST00000117047 342 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm14921-201ENSMUST00000118643 908 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm29615-201ENSMUST00000185371 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm28224-201ENSMUST00000186078 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm29001-201ENSMUST00000186177 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm28292-201ENSMUST00000186593 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm28101-201ENSMUST00000187608 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm29076-201ENSMUST00000187689 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm28302-201ENSMUST00000187931 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm28646-201ENSMUST00000188220 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm28205-201ENSMUST00000189177 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm29032-201ENSMUST00000189797 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm28695-201ENSMUST00000190300 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm37448-201ENSMUST00000192795 697 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.62□□□□□ -0.55
Cacna1aP97445 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cacna1aP97445 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms