Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Gm7809-201ENSMUST00000153199 742 ntBASIC13.79□□□□□ -0.2
Lig3P97386 Gm22334-201ENSMUST00000158070 133 ntBASIC13.79□□□□□ -0.2
Lig3P97386 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.79□□□□□ -0.2
Lig3P97386 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.79□□□□□ -0.2
Lig3P97386 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.79□□□□□ -0.2
Lig3P97386 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.79□□□□□ -0.2
Lig3P97386 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lig3P97386 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.79□□□□□ -0.2
Lig3P97386 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.79□□□□□ -0.2
Lig3P97386 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lig3P97386 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lig3P97386 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Gm4909-201ENSMUST00000118749 794 ntBASIC13.78□□□□□ -0.2
Lig3P97386 Gm13123-201ENSMUST00000122173 492 ntBASIC13.78□□□□□ -0.2
Lig3P97386 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.78□□□□□ -0.2
Lig3P97386 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Lig3P97386 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.78□□□□□ -0.2
Lig3P97386 Gm43947-201ENSMUST00000203019 959 ntBASIC13.78□□□□□ -0.2
Lig3P97386 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.78□□□□□ -0.2
Lig3P97386 Gm45186-201ENSMUST00000206874 478 ntBASIC13.78□□□□□ -0.2
Lig3P97386 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.78□□□□□ -0.2
Lig3P97386 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.78□□□□□ -0.2
Lig3P97386 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.78□□□□□ -0.2
Lig3P97386 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.78□□□□□ -0.2
Lig3P97386 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Lig3P97386 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Lig3P97386 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Lig3P97386 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.78□□□□□ -0.2
Lig3P97386 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lig3P97386 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lig3P97386 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Lig3P97386 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Lig3P97386 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lig3P97386 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
Lig3P97386 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
Lig3P97386 Gm24830-201ENSMUST00000102024 166 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Lig3P97386 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Gm25890-201ENSMUST00000177643 165 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Gm22614-201ENSMUST00000178300 165 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Gm2260-201ENSMUST00000184965 657 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lig3P97386 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lig3P97386 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lig3P97386 Gm19208-201ENSMUST00000213861 912 ntBASIC13.77□□□□□ -0.21
Lig3P97386 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Lig3P97386 Morn2-202ENSMUST00000227729 656 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms