Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.41□□□□□ -0.42
Shox2P70390 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.41□□□□□ -0.42
Shox2P70390 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shox2P70390 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.41□□□□□ -0.42
Shox2P70390 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Shox2P70390 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Shox2P70390 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.4□□□□□ -0.42
Shox2P70390 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.4□□□□□ -0.42
Shox2P70390 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Gm6458-201ENSMUST00000211573 635 ntBASIC12.4□□□□□ -0.42
Shox2P70390 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Shox2P70390 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shox2P70390 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Shox2P70390 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Shox2P70390 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Shox2P70390 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Shox2P70390 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Shox2P70390 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Gm8410-201ENSMUST00000117225 605 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Gm27680-201ENSMUST00000184192 160 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Gm10253-201ENSMUST00000194270 940 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Gm42550-201ENSMUST00000201553 960 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.39□□□□□ -0.43
Shox2P70390 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.39□□□□□ -0.43
Shox2P70390 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Gm16372-201ENSMUST00000073088 450 ntBASIC12.39□□□□□ -0.43
Shox2P70390 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Shox2P70390 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.39□□□□□ -0.43
Shox2P70390 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shox2P70390 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.39□□□□□ -0.43
Shox2P70390 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms