Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.11■□□□□ 0.01
Rad50P70388 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rad50P70388 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rad50P70388 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rad50P70388 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rad50P70388 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rad50P70388 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.11■□□□□ 0.01
Rad50P70388 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rad50P70388 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rad50P70388 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rad50P70388 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.1■□□□□ 0.01
Rad50P70388 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.1■□□□□ 0.01
Rad50P70388 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.1■□□□□ 0.01
Rad50P70388 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rad50P70388 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.1■□□□□ 0.01
Rad50P70388 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Gm15236-201ENSMUST00000117309 379 ntBASIC15.1■□□□□ 0.01
Rad50P70388 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.1■□□□□ 0.01
Rad50P70388 Gm24548-201ENSMUST00000158650 108 ntBASIC15.1■□□□□ 0.01
Rad50P70388 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Gm24526-201ENSMUST00000082921 158 ntBASIC15.1■□□□□ 0.01
Rad50P70388 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Rad50P70388 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rad50P70388 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rad50P70388 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.09■□□□□ 0.01
Rad50P70388 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rad50P70388 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.09■□□□□ 0.01
Rad50P70388 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.09■□□□□ 0.01
Rad50P70388 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rad50P70388 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rad50P70388 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rad50P70388 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.09■□□□□ 0.01
Rad50P70388 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rad50P70388 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.09■□□□□ 0.01
Rad50P70388 Gm9630-201ENSMUST00000178304 885 ntBASIC15.09■□□□□ 0.01
Rad50P70388 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.09■□□□□ 0.01
Rad50P70388 Gm6621-201ENSMUST00000193251 772 ntBASIC15.09■□□□□ 0.01
Rad50P70388 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.09■□□□□ 0.01
Rad50P70388 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rad50P70388 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.09■□□□□ 0.01
Rad50P70388 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rad50P70388 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.08■□□□□ 0.01
Rad50P70388 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rad50P70388 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rad50P70388 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rad50P70388 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.08■□□□□ 0.01
Rad50P70388 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rad50P70388 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.08■□□□□ 0
Rad50P70388 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rad50P70388 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rad50P70388 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.08■□□□□ 0
Rad50P70388 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.08■□□□□ 0
Rad50P70388 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.08■□□□□ 0
Rad50P70388 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rad50P70388 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rad50P70388 Gm37259-201ENSMUST00000193903 849 ntBASIC15.08■□□□□ 0
Rad50P70388 Gm21769-201ENSMUST00000211922 111 ntBASIC15.08■□□□□ 0
Rad50P70388 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rad50P70388 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rad50P70388 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rad50P70388 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms