Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC20.17■□□□□ 0.82
Cux2P70298 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Gm24248-201ENSMUST00000157321 322 ntBASIC20.17■□□□□ 0.82
Cux2P70298 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Gm44315-201ENSMUST00000203041 219 ntBASIC20.17■□□□□ 0.82
Cux2P70298 Gm18499-201ENSMUST00000220808 1021 ntBASIC20.17■□□□□ 0.82
Cux2P70298 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cux2P70298 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cux2P70298 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cux2P70298 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Gm13117-201ENSMUST00000120894 691 ntBASIC20.16■□□□□ 0.82
Cux2P70298 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC20.16■□□□□ 0.82
Cux2P70298 Gm43852-201ENSMUST00000202098 917 ntBASIC20.16■□□□□ 0.82
Cux2P70298 Gm44953-201ENSMUST00000208745 1286 ntBASIC20.16■□□□□ 0.82
Cux2P70298 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cux2P70298 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cux2P70298 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Cux2P70298 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Cux2P70298 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC20.15■□□□□ 0.82
Cux2P70298 Gm11502-201ENSMUST00000120917 1211 ntBASIC20.15■□□□□ 0.82
Cux2P70298 Gm12453-201ENSMUST00000121981 331 ntBASIC20.15■□□□□ 0.82
Cux2P70298 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC20.15■□□□□ 0.82
Cux2P70298 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC20.15■□□□□ 0.82
Cux2P70298 Gm9136-201ENSMUST00000193368 454 ntBASIC20.15■□□□□ 0.82
Cux2P70298 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC20.15■□□□□ 0.82
Cux2P70298 AC154361.2-201ENSMUST00000224747 943 ntBASIC20.15■□□□□ 0.82
Cux2P70298 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cux2P70298 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Cux2P70298 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cux2P70298 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cux2P70298 AC148324.1-201ENSMUST00000219034 4240 ntBASIC20.15■□□□□ 0.82
Cux2P70298 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cux2P70298 Gm43807-201ENSMUST00000200678 1781 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cux2P70298 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.14■□□□□ 0.81
Cux2P70298 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Gm11578-201ENSMUST00000118530 459 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm7150-201ENSMUST00000122032 981 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm37981-201ENSMUST00000194280 535 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm5340-201ENSMUST00000203733 880 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm6855-201ENSMUST00000206307 790 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm3433-201ENSMUST00000210149 1058 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm45758-201ENSMUST00000212448 1006 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gm14005-208ENSMUST00000223654 681 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Gm37131-201ENSMUST00000192502 1561 ntBASIC20.14■□□□□ 0.81
Cux2P70298 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cux2P70298 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cux2P70298 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms