Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Rpl39P62892 Gm9061-201ENSMUST00000182707 1006 ntBASIC8.96□□□□□ -0.98
Rpl39P62892 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Rpl39P62892 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC8.96□□□□□ -0.98
Rpl39P62892 AC151286.1-201ENSMUST00000198489 145 ntBASIC8.96□□□□□ -0.98
Rpl39P62892 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Rpl39P62892 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC8.96□□□□□ -0.98
Rpl39P62892 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC8.96□□□□□ -0.98
Rpl39P62892 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.96□□□□□ -0.98
Rpl39P62892 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC8.96□□□□□ -0.98
Rpl39P62892 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC8.96□□□□□ -0.98
Rpl39P62892 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC8.96□□□□□ -0.98
Rpl39P62892 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Rpl39P62892 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Rpl39P62892 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC8.96□□□□□ -0.98
Rpl39P62892 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Rpl39P62892 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Rpl39P62892 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Mbnl2-204ENSMUST00000227012 2390 ntBASIC8.95□□□□□ -0.98
Rpl39P62892 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Rpl39P62892 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
Rpl39P62892 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC8.95□□□□□ -0.98
Rpl39P62892 Gm13223-201ENSMUST00000118609 747 ntBASIC8.95□□□□□ -0.98
Rpl39P62892 Gm12416-201ENSMUST00000120911 1008 ntBASIC8.95□□□□□ -0.98
Rpl39P62892 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Gm27390-201ENSMUST00000184516 176 ntBASIC8.95□□□□□ -0.98
Rpl39P62892 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Rpl39P62892 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Rpl39P62892 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC8.95□□□□□ -0.98
Rpl39P62892 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rpl39P62892 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms