Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tpm2P58774 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tpm2P58774 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.48□□□□□ -0.09
Tpm2P58774 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.48□□□□□ -0.09
Tpm2P58774 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.48□□□□□ -0.09
Tpm2P58774 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tpm2P58774 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tpm2P58774 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.48□□□□□ -0.09
Tpm2P58774 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm2P58774 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.47□□□□□ -0.09
Tpm2P58774 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tpm2P58774 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Tpm2P58774 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.47□□□□□ -0.09
Tpm2P58774 Mir6956-201ENSMUST00000183598 62 ntBASIC14.47□□□□□ -0.09
Tpm2P58774 Gm7063-201ENSMUST00000186840 981 ntBASIC14.47□□□□□ -0.09
Tpm2P58774 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.47□□□□□ -0.09
Tpm2P58774 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.47□□□□□ -0.09
Tpm2P58774 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm2P58774 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Tpm2P58774 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm2P58774 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm2P58774 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Gm45496-201ENSMUST00000209918 2917 ntBASIC14.47□□□□□ -0.09
Tpm2P58774 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm2P58774 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm2P58774 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tpm2P58774 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm2P58774 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Tpm2P58774 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tpm2P58774 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tpm2P58774 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tpm2P58774 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
Tpm2P58774 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tpm2P58774 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.46□□□□□ -0.09
Tpm2P58774 Gm28760-201ENSMUST00000185995 736 ntBASIC14.46□□□□□ -0.09
Tpm2P58774 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.46□□□□□ -0.09
Tpm2P58774 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.46□□□□□ -0.09
Tpm2P58774 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tpm2P58774 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.46□□□□□ -0.09
Tpm2P58774 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm2P58774 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Tpm2P58774 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.46□□□□□ -0.1
Tpm2P58774 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm2P58774 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.45□□□□□ -0.1
Tpm2P58774 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms