Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rrp1P56183 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Rrp1P56183 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.19□□□□□ -0.14
Rrp1P56183 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.19□□□□□ -0.14
Rrp1P56183 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.18□□□□□ -0.14
Rrp1P56183 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Gm11478-201ENSMUST00000117851 599 ntBASIC14.18□□□□□ -0.14
Rrp1P56183 Gm12384-201ENSMUST00000119228 919 ntBASIC14.18□□□□□ -0.14
Rrp1P56183 Gm17208-201ENSMUST00000168388 535 ntBASIC14.18□□□□□ -0.14
Rrp1P56183 Gm27701-201ENSMUST00000184498 110 ntBASIC14.18□□□□□ -0.14
Rrp1P56183 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.18□□□□□ -0.14
Rrp1P56183 Gm35960-201ENSMUST00000202712 767 ntBASIC14.18□□□□□ -0.14
Rrp1P56183 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.18□□□□□ -0.14
Rrp1P56183 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.18□□□□□ -0.14
Rrp1P56183 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rrp1P56183 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrp1P56183 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rrp1P56183 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rrp1P56183 Gm24231-201ENSMUST00000104315 133 ntBASIC14.17□□□□□ -0.14
Rrp1P56183 Gm12138-201ENSMUST00000122180 951 ntBASIC14.17□□□□□ -0.14
Rrp1P56183 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rrp1P56183 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.17□□□□□ -0.14
Rrp1P56183 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.17□□□□□ -0.14
Rrp1P56183 Gm45384-201ENSMUST00000210451 277 ntBASIC14.17□□□□□ -0.14
Rrp1P56183 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.17□□□□□ -0.14
Rrp1P56183 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.17□□□□□ -0.14
Rrp1P56183 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rrp1P56183 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Rrp1P56183 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rrp1P56183 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rrp1P56183 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rrp1P56183 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrp1P56183 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rrp1P56183 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rrp1P56183 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rrp1P56183 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rrp1P56183 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.16□□□□□ -0.14
Rrp1P56183 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rrp1P56183 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.16□□□□□ -0.14
Rrp1P56183 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.16□□□□□ -0.14
Rrp1P56183 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Gm7287-201ENSMUST00000205267 602 ntBASIC14.16□□□□□ -0.14
Rrp1P56183 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rrp1P56183 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms