Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.3□□□□□ -0.44
Cdh5P55284 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.3□□□□□ -0.44
Cdh5P55284 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh5P55284 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh5P55284 Gm5687-201ENSMUST00000118252 640 ntBASIC12.3□□□□□ -0.44
Cdh5P55284 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.3□□□□□ -0.44
Cdh5P55284 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Gm22331-201ENSMUST00000158066 136 ntBASIC12.3□□□□□ -0.44
Cdh5P55284 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Proscos-202ENSMUST00000178990 666 ntBASIC12.3□□□□□ -0.44
Cdh5P55284 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh5P55284 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh5P55284 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Cdh5P55284 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.3□□□□□ -0.44
Cdh5P55284 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh5P55284 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh5P55284 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh5P55284 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdh5P55284 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Gm13226-201ENSMUST00000117838 404 ntBASIC12.29□□□□□ -0.44
Cdh5P55284 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdh5P55284 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh5P55284 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdh5P55284 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.29□□□□□ -0.44
Cdh5P55284 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh5P55284 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.29□□□□□ -0.44
Cdh5P55284 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.29□□□□□ -0.44
Cdh5P55284 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
Cdh5P55284 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh5P55284 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Cdh5P55284 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 Mir7221-201ENSMUST00000184009 72 ntBASIC12.28□□□□□ -0.44
Cdh5P55284 Gm27731-201ENSMUST00000185192 107 ntBASIC12.28□□□□□ -0.44
Cdh5P55284 AY702102-202ENSMUST00000194651 1173 ntBASIC12.28□□□□□ -0.44
Cdh5P55284 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.28□□□□□ -0.44
Cdh5P55284 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Cdh5P55284 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.28□□□□□ -0.44
Cdh5P55284 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh5P55284 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh5P55284 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms