Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.18□□□□□ -0.3
NcanP55066 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.18□□□□□ -0.3
NcanP55066 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.18□□□□□ -0.3
NcanP55066 Gm15352-201ENSMUST00000118696 270 ntBASIC13.18□□□□□ -0.3
NcanP55066 Gm7722-201ENSMUST00000120646 741 ntBASIC13.18□□□□□ -0.3
NcanP55066 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Rprl1-201ENSMUST00000158050 327 ntBASIC13.18□□□□□ -0.3
NcanP55066 Gm3329-201ENSMUST00000159873 556 ntBASIC13.18□□□□□ -0.3
NcanP55066 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Gm7985-201ENSMUST00000183329 981 ntBASIC13.18□□□□□ -0.3
NcanP55066 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
NcanP55066 Gm18059-201ENSMUST00000208073 580 ntBASIC13.18□□□□□ -0.3
NcanP55066 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.18□□□□□ -0.3
NcanP55066 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.18□□□□□ -0.3
NcanP55066 Gm3619-201ENSMUST00000219947 775 ntBASIC13.18□□□□□ -0.3
NcanP55066 Gm19009-201ENSMUST00000223072 823 ntBASIC13.18□□□□□ -0.3
NcanP55066 Gm4604-201ENSMUST00000025040 390 ntBASIC13.18□□□□□ -0.3
NcanP55066 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NcanP55066 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NcanP55066 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NcanP55066 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NcanP55066 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
NcanP55066 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
NcanP55066 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.17□□□□□ -0.3
NcanP55066 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.17□□□□□ -0.3
NcanP55066 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.17□□□□□ -0.3
NcanP55066 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.17□□□□□ -0.3
NcanP55066 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.17□□□□□ -0.3
NcanP55066 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.17□□□□□ -0.3
NcanP55066 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NcanP55066 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.17□□□□□ -0.3
NcanP55066 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NcanP55066 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.16□□□□□ -0.3
NcanP55066 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
NcanP55066 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Gm26013-201ENSMUST00000104404 119 ntBASIC13.16□□□□□ -0.3
NcanP55066 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.16□□□□□ -0.3
NcanP55066 Gm15566-201ENSMUST00000121130 590 ntBASIC13.16□□□□□ -0.3
NcanP55066 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.16□□□□□ -0.3
NcanP55066 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC13.16□□□□□ -0.3
NcanP55066 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Gm23045-201ENSMUST00000175041 96 ntBASIC13.16□□□□□ -0.3
NcanP55066 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NcanP55066 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
NcanP55066 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.16□□□□□ -0.3
NcanP55066 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.16□□□□□ -0.3
NcanP55066 Gm8531-201ENSMUST00000188319 893 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms