Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC19.02■□□□□ 0.64
Cux1P53564 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Gm44882-201ENSMUST00000205702 802 ntBASIC19.02■□□□□ 0.64
Cux1P53564 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cux1P53564 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC19.02■□□□□ 0.64
Cux1P53564 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cux1P53564 Gm18782-201ENSMUST00000209023 1399 ntBASIC19.02■□□□□ 0.63
Cux1P53564 Gm13910-201ENSMUST00000121752 1428 ntBASIC19.02■□□□□ 0.63
Cux1P53564 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Cux1P53564 AC173482.6-201ENSMUST00000225889 1741 ntBASIC19.01■□□□□ 0.63
Cux1P53564 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Cux1P53564 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cux1P53564 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Gm15004-201ENSMUST00000119192 630 ntBASIC19.01■□□□□ 0.63
Cux1P53564 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC19.01■□□□□ 0.63
Cux1P53564 Gm23771-201ENSMUST00000178702 110 ntBASIC19.01■□□□□ 0.63
Cux1P53564 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC19.01■□□□□ 0.63
Cux1P53564 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC19.01■□□□□ 0.63
Cux1P53564 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC19.01■□□□□ 0.63
Cux1P53564 Gm6867-201ENSMUST00000219165 425 ntBASIC19.01■□□□□ 0.63
Cux1P53564 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cux1P53564 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.01■□□□□ 0.63
Cux1P53564 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux1P53564 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Cux1P53564 Gm11663-201ENSMUST00000117888 290 ntBASIC19■□□□□ 0.63
Cux1P53564 Gm15352-201ENSMUST00000118696 270 ntBASIC19■□□□□ 0.63
Cux1P53564 Mir1956-201ENSMUST00000157748 65 ntBASIC19■□□□□ 0.63
Cux1P53564 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC19■□□□□ 0.63
Cux1P53564 Gm38117-201ENSMUST00000194653 939 ntBASIC19■□□□□ 0.63
Cux1P53564 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC19■□□□□ 0.63
Cux1P53564 Gm43186-201ENSMUST00000198130 824 ntBASIC19■□□□□ 0.63
Cux1P53564 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC19■□□□□ 0.63
Cux1P53564 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 AC112945.1-201ENSMUST00000226413 514 ntBASIC19■□□□□ 0.63
Cux1P53564 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cux1P53564 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cux1P53564 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cux1P53564 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cux1P53564 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC19■□□□□ 0.63
Cux1P53564 Gm11675-201ENSMUST00000121873 832 ntBASIC19■□□□□ 0.63
Cux1P53564 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC19■□□□□ 0.63
Cux1P53564 Gm6485-201ENSMUST00000160676 439 ntBASIC19■□□□□ 0.63
Cux1P53564 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Gm18893-201ENSMUST00000198416 943 ntBASIC19■□□□□ 0.63
Cux1P53564 Gm44270-201ENSMUST00000203084 1234 ntBASIC19■□□□□ 0.63
Cux1P53564 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux1P53564 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cux1P53564 AC154262.2-202ENSMUST00000225158 1331 ntBASIC18.99■□□□□ 0.63
Cux1P53564 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cux1P53564 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux1P53564 Gm13328-201ENSMUST00000120816 1020 ntBASIC18.99■□□□□ 0.63
Cux1P53564 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC18.99■□□□□ 0.63
Cux1P53564 Gm18367-201ENSMUST00000176139 600 ntBASIC18.99■□□□□ 0.63
Cux1P53564 Gm8492-201ENSMUST00000182375 987 ntBASIC18.99■□□□□ 0.63
Cux1P53564 Gm7593-201ENSMUST00000187246 644 ntBASIC18.99■□□□□ 0.63
Cux1P53564 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC18.99■□□□□ 0.63
Cux1P53564 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms