Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm17376-201ENSMUST00000166016 84 ntBASIC12.73□□□□□ -0.37
Lhx3P50481 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.73□□□□□ -0.37
Lhx3P50481 Gm8885-201ENSMUST00000189382 598 ntBASIC12.73□□□□□ -0.37
Lhx3P50481 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.73□□□□□ -0.37
Lhx3P50481 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.73□□□□□ -0.37
Lhx3P50481 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lhx3P50481 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm11930-201ENSMUST00000117788 190 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm9630-201ENSMUST00000178304 885 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 Gm27320-201ENSMUST00000184892 109 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm44958-201ENSMUST00000203734 736 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Lhx3P50481 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lhx3P50481 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Lhx3P50481 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.72□□□□□ -0.37
Lhx3P50481 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx3P50481 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.71□□□□□ -0.37
Lhx3P50481 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Gm3096-201ENSMUST00000185770 364 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms