Protein–RNA interactions for Protein: P50207

Hoxc13, Homeobox protein Hox-C13, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc13P50207 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm14017-201ENSMUST00000121934 386 ntBASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.67□□□□□ -0.22
Hoxc13P50207 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm8913-201ENSMUST00000209491 641 ntBASIC13.67□□□□□ -0.22
Hoxc13P50207 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc13P50207 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc13P50207 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Hoxc13P50207 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm23912-201ENSMUST00000104687 87 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm14247-201ENSMUST00000120950 237 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Rprl1-201ENSMUST00000158050 327 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc13P50207 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm2383-201ENSMUST00000181461 807 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm29199-201ENSMUST00000187766 775 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm37666-201ENSMUST00000194110 866 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hoxc13P50207 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.66□□□□□ -0.22
Hoxc13P50207 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc13P50207 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc13P50207 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc13P50207 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hoxc13P50207 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.65□□□□□ -0.22
Hoxc13P50207 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hoxc13P50207 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc13P50207 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc13P50207 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hoxc13P50207 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.65□□□□□ -0.22
Hoxc13P50207 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc13P50207 Gm11989-201ENSMUST00000117240 672 ntBASIC13.65□□□□□ -0.22
Hoxc13P50207 Gm11362-201ENSMUST00000118838 850 ntBASIC13.65□□□□□ -0.22
Hoxc13P50207 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc13P50207 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Hoxc13P50207 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc13P50207 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.65□□□□□ -0.22
Hoxc13P50207 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms