Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.87□□□□□ -0.19
Brca1P48754 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Brca1P48754 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Brca1P48754 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.86□□□□□ -0.19
Brca1P48754 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.86□□□□□ -0.19
Brca1P48754 Gm44882-201ENSMUST00000205702 802 ntBASIC13.86□□□□□ -0.19
Brca1P48754 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.86□□□□□ -0.19
Brca1P48754 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.86□□□□□ -0.19
Brca1P48754 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.86□□□□□ -0.19
Brca1P48754 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brca1P48754 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.85□□□□□ -0.19
Brca1P48754 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Gm5714-201ENSMUST00000197343 566 ntBASIC13.85□□□□□ -0.19
Brca1P48754 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.85□□□□□ -0.19
Brca1P48754 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Brca1P48754 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Brca1P48754 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Gm11836-201ENSMUST00000121022 441 ntBASIC13.85□□□□□ -0.19
Brca1P48754 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.85□□□□□ -0.19
Brca1P48754 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.85□□□□□ -0.19
Brca1P48754 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.85□□□□□ -0.19
Brca1P48754 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Brca1P48754 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.85□□□□□ -0.19
Brca1P48754 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.85□□□□□ -0.19
Brca1P48754 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.85□□□□□ -0.19
Brca1P48754 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.85□□□□□ -0.19
Brca1P48754 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brca1P48754 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Brca1P48754 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms