Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Xcl1P47993 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Xcl1P47993 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Xcl1P47993 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
Xcl1P47993 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Xcl1P47993 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Xcl1P47993 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Xcl1P47993 Gm42913-201ENSMUST00000197936 1853 ntBASIC8.09□□□□□ -1.12
Xcl1P47993 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Xcl1P47993 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Xcl1P47993 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm6161-201ENSMUST00000121942 1102 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC8.08□□□□□ -1.12
Xcl1P47993 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Xcl1P47993 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm6254-201ENSMUST00000168178 1072 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Gm6153-201ENSMUST00000172004 1058 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Xcl1P47993 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm4535-201ENSMUST00000182274 558 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm5641-202ENSMUST00000198699 1080 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 CT010486.3-201ENSMUST00000224555 811 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 CT573086.1-201ENSMUST00000227202 1074 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Cmtm5-203ENSMUST00000227441 610 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm10355-201ENSMUST00000097146 517 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Gm37500-201ENSMUST00000192059 1443 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm44826-201ENSMUST00000207648 2332 ntBASIC8.08□□□□□ -1.12
Xcl1P47993 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Xcl1P47993 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Xcl1P47993 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Xcl1P47993 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Xcl1P47993 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Xcl1P47993 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC8.07□□□□□ -1.12
Xcl1P47993 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Xcl1P47993 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Xcl1P47993 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Xcl1P47993 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Xcl1P47993 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC8.07□□□□□ -1.12
Xcl1P47993 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.07□□□□□ -1.12
Xcl1P47993 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Xcl1P47993 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms