Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gli1P47806 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gli1P47806 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gli1P47806 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gli1P47806 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gli1P47806 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gli1P47806 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gli1P47806 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.3□□□□□ -0.44
Gli1P47806 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.3□□□□□ -0.44
Gli1P47806 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.3□□□□□ -0.44
Gli1P47806 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gli1P47806 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gli1P47806 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Gli1P47806 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Gli1P47806 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gli1P47806 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.29□□□□□ -0.44
Gli1P47806 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Gli1P47806 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.29□□□□□ -0.44
Gli1P47806 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Gm23931-201ENSMUST00000103842 109 ntBASIC12.29□□□□□ -0.44
Gli1P47806 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.29□□□□□ -0.44
Gli1P47806 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.29□□□□□ -0.44
Gli1P47806 Gm27514-201ENSMUST00000183692 110 ntBASIC12.29□□□□□ -0.44
Gli1P47806 Gm27243-201ENSMUST00000183964 521 ntBASIC12.29□□□□□ -0.44
Gli1P47806 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.29□□□□□ -0.44
Gli1P47806 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.29□□□□□ -0.44
Gli1P47806 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.29□□□□□ -0.44
Gli1P47806 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.29□□□□□ -0.44
Gli1P47806 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gli1P47806 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.28□□□□□ -0.44
Gli1P47806 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gli1P47806 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms