Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.98□□□□□ -0.33
HttP42859 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
HttP42859 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HttP42859 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HttP42859 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.97□□□□□ -0.33
HttP42859 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HttP42859 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HttP42859 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HttP42859 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
HttP42859 Gm14234-201ENSMUST00000119539 845 ntBASIC12.97□□□□□ -0.33
HttP42859 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.97□□□□□ -0.33
HttP42859 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HttP42859 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HttP42859 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Gm16459-201ENSMUST00000121443 686 ntBASIC12.97□□□□□ -0.33
HttP42859 Gm13445-201ENSMUST00000121664 307 ntBASIC12.97□□□□□ -0.33
HttP42859 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.97□□□□□ -0.33
HttP42859 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HttP42859 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HttP42859 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
HttP42859 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.96□□□□□ -0.33
HttP42859 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Gm11783-201ENSMUST00000119549 885 ntBASIC12.96□□□□□ -0.33
HttP42859 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.96□□□□□ -0.33
HttP42859 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HttP42859 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 Mir744-201ENSMUST00000103261 100 ntBASIC12.96□□□□□ -0.34
HttP42859 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 Gm25677-201ENSMUST00000174983 72 ntBASIC12.96□□□□□ -0.34
HttP42859 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.96□□□□□ -0.34
HttP42859 Gm6331-201ENSMUST00000217890 450 ntBASIC12.96□□□□□ -0.34
HttP42859 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.96□□□□□ -0.34
HttP42859 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.96□□□□□ -0.34
HttP42859 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
HttP42859 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HttP42859 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Gm14247-201ENSMUST00000120950 237 ntBASIC12.95□□□□□ -0.34
HttP42859 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.95□□□□□ -0.34
HttP42859 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HttP42859 Gm26875-201ENSMUST00000181006 950 ntBASIC12.95□□□□□ -0.34
HttP42859 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Gm7627-201ENSMUST00000183205 999 ntBASIC12.95□□□□□ -0.34
HttP42859 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.95□□□□□ -0.34
HttP42859 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.95□□□□□ -0.34
HttP42859 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.95□□□□□ -0.34
HttP42859 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
HttP42859 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.95□□□□□ -0.34
HttP42859 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
HttP42859 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms