Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Rpl28P41105 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl28P41105 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC8.47□□□□□ -1.05
Rpl28P41105 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Rpl28P41105 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC8.47□□□□□ -1.05
Rpl28P41105 Gm9630-201ENSMUST00000178304 885 ntBASIC8.47□□□□□ -1.05
Rpl28P41105 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC8.47□□□□□ -1.05
Rpl28P41105 Gm43094-201ENSMUST00000196549 921 ntBASIC8.47□□□□□ -1.05
Rpl28P41105 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl28P41105 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Rpl28P41105 Gm7730-201ENSMUST00000212486 454 ntBASIC8.47□□□□□ -1.05
Rpl28P41105 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.47□□□□□ -1.05
Rpl28P41105 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rpl28P41105 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl28P41105 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rpl28P41105 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl28P41105 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl28P41105 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC8.47□□□□□ -1.05
Rpl28P41105 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl28P41105 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Rpl28P41105 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
Rpl28P41105 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.05
Rpl28P41105 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
Rpl28P41105 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Rpl28P41105 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rpl28P41105 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC8.46□□□□□ -1.06
Rpl28P41105 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC8.46□□□□□ -1.06
Rpl28P41105 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm12416-201ENSMUST00000120911 1008 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC8.46□□□□□ -1.06
Rpl28P41105 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC8.46□□□□□ -1.06
Rpl28P41105 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm42550-201ENSMUST00000201553 960 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Gm44855-201ENSMUST00000205725 362 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Gm44985-201ENSMUST00000206202 1016 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm17870-201ENSMUST00000219489 1174 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 AC154687.2-201ENSMUST00000223853 640 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 AC169036.1-201ENSMUST00000227994 296 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC8.46□□□□□ -1.06
Rpl28P41105 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Rpl28P41105 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm38376-201ENSMUST00000195493 2253 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm40377-201ENSMUST00000204604 2015 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Gm6211-201ENSMUST00000147973 4275 ntBASIC8.46□□□□□ -1.06
Rpl28P41105 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rpl28P41105 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms