Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Upk2P38575 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk2P38575 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Upk2P38575 Gm13829-201ENSMUST00000119600 138 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Upk2P38575 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.03□□□□□ -0.64
Upk2P38575 Gm7809-201ENSMUST00000153199 742 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Gm8738-201ENSMUST00000172606 329 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Gm8018-201ENSMUST00000173536 789 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.03□□□□□ -0.64
Upk2P38575 Gm18187-201ENSMUST00000196476 984 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.03□□□□□ -0.64
Upk2P38575 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Upk2P38575 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Upk2P38575 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk2P38575 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.02□□□□□ -0.64
Upk2P38575 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Upk2P38575 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk2P38575 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Upk2P38575 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk2P38575 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk2P38575 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.02□□□□□ -0.64
Upk2P38575 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk2P38575 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk2P38575 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk2P38575 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Upk2P38575 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.02□□□□□ -0.65
Upk2P38575 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Upk2P38575 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Upk2P38575 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Upk2P38575 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Upk2P38575 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Upk2P38575 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.02□□□□□ -0.65
Upk2P38575 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Gm3890-201ENSMUST00000182416 207 ntBASIC11.02□□□□□ -0.65
Upk2P38575 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.02□□□□□ -0.65
Upk2P38575 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Gm5781-201ENSMUST00000219792 443 ntBASIC11.02□□□□□ -0.65
Upk2P38575 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.02□□□□□ -0.65
Upk2P38575 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Gm22058-201ENSMUST00000083393 310 ntBASIC11.02□□□□□ -0.65
Upk2P38575 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Upk2P38575 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.02□□□□□ -0.65
Upk2P38575 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk2P38575 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.01□□□□□ -0.65
Upk2P38575 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Upk2P38575 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Upk2P38575 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.01□□□□□ -0.65
Upk2P38575 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.01□□□□□ -0.65
Upk2P38575 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms