Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lig1P37913 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig1P37913 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.33□□□□□ -0.12
Lig1P37913 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lig1P37913 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Lig1P37913 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.33□□□□□ -0.12
Lig1P37913 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Lig1P37913 Gm14208-201ENSMUST00000119645 678 ntBASIC14.33□□□□□ -0.12
Lig1P37913 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.33□□□□□ -0.12
Lig1P37913 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.33□□□□□ -0.12
Lig1P37913 B9d1os-201ENSMUST00000137010 674 ntBASIC14.33□□□□□ -0.12
Lig1P37913 Gm6963-201ENSMUST00000147879 379 ntBASIC14.33□□□□□ -0.12
Lig1P37913 Gm28882-201ENSMUST00000185504 314 ntBASIC14.33□□□□□ -0.12
Lig1P37913 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.33□□□□□ -0.12
Lig1P37913 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.33□□□□□ -0.12
Lig1P37913 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.33□□□□□ -0.12
Lig1P37913 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lig1P37913 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.33□□□□□ -0.12
Lig1P37913 Rubie-203ENSMUST00000227803 2430 ntBASIC14.33□□□□□ -0.12
Lig1P37913 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig1P37913 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lig1P37913 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.32□□□□□ -0.12
Lig1P37913 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lig1P37913 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.32□□□□□ -0.12
Lig1P37913 Gm12314-201ENSMUST00000118104 538 ntBASIC14.32□□□□□ -0.12
Lig1P37913 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.32□□□□□ -0.12
Lig1P37913 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Gm22902-201ENSMUST00000158488 302 ntBASIC14.32□□□□□ -0.12
Lig1P37913 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.32□□□□□ -0.12
Lig1P37913 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.32□□□□□ -0.12
Lig1P37913 Gm5070-201ENSMUST00000177599 862 ntBASIC14.32□□□□□ -0.12
Lig1P37913 Gm32999-201ENSMUST00000192693 562 ntBASIC14.32□□□□□ -0.12
Lig1P37913 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Lig1P37913 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.32□□□□□ -0.12
Lig1P37913 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lig1P37913 Gm10076-201ENSMUST00000073238 384 ntBASIC14.32□□□□□ -0.12
Lig1P37913 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lig1P37913 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.32□□□□□ -0.12
Lig1P37913 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.32□□□□□ -0.12
Lig1P37913 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Lig1P37913 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.32□□□□□ -0.12
Lig1P37913 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig1P37913 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.31□□□□□ -0.12
Lig1P37913 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Lig1P37913 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.31□□□□□ -0.12
Lig1P37913 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lig1P37913 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.31□□□□□ -0.12
Lig1P37913 Gm24845-201ENSMUST00000158034 109 ntBASIC14.31□□□□□ -0.12
Lig1P37913 Gm28450-201ENSMUST00000187349 638 ntBASIC14.31□□□□□ -0.12
Lig1P37913 Gm45433-201ENSMUST00000209386 247 ntBASIC14.31□□□□□ -0.12
Lig1P37913 Gm8913-201ENSMUST00000209491 641 ntBASIC14.31□□□□□ -0.12
Lig1P37913 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lig1P37913 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig1P37913 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms