Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Nedd1P33215 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.08□□□□□ -0.16
Nedd1P33215 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Gm15808-201ENSMUST00000119046 604 ntBASIC14.08□□□□□ -0.16
Nedd1P33215 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.08□□□□□ -0.16
Nedd1P33215 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Gm6963-201ENSMUST00000147879 379 ntBASIC14.08□□□□□ -0.16
Nedd1P33215 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.08□□□□□ -0.16
Nedd1P33215 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.08□□□□□ -0.16
Nedd1P33215 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.08□□□□□ -0.16
Nedd1P33215 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.08□□□□□ -0.16
Nedd1P33215 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd1P33215 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nedd1P33215 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nedd1P33215 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Gm24934-201ENSMUST00000103764 111 ntBASIC14.07□□□□□ -0.16
Nedd1P33215 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.07□□□□□ -0.16
Nedd1P33215 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.07□□□□□ -0.16
Nedd1P33215 Gm5070-201ENSMUST00000177599 862 ntBASIC14.07□□□□□ -0.16
Nedd1P33215 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.07□□□□□ -0.16
Nedd1P33215 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.07□□□□□ -0.16
Nedd1P33215 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.07□□□□□ -0.16
Nedd1P33215 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nedd1P33215 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.07□□□□□ -0.16
Nedd1P33215 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Nedd1P33215 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nedd1P33215 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Nedd1P33215 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.07□□□□□ -0.16
Nedd1P33215 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nedd1P33215 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd1P33215 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Nedd1P33215 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.06□□□□□ -0.16
Nedd1P33215 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nedd1P33215 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nedd1P33215 Gm13665-201ENSMUST00000120830 528 ntBASIC14.06□□□□□ -0.16
Nedd1P33215 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.06□□□□□ -0.16
Nedd1P33215 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Gm19994-201ENSMUST00000217086 586 ntBASIC14.06□□□□□ -0.16
Nedd1P33215 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.06□□□□□ -0.16
Nedd1P33215 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.06□□□□□ -0.16
Nedd1P33215 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Gm9996-201ENSMUST00000070359 913 ntBASIC14.06□□□□□ -0.16
Nedd1P33215 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd1P33215 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms