Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gm13453-201ENSMUST00000118708 357 ntBASIC9.94□□□□□ -0.82
Rom1P32958 Gm12384-201ENSMUST00000119228 919 ntBASIC9.94□□□□□ -0.82
Rom1P32958 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.94□□□□□ -0.82
Rom1P32958 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.94□□□□□ -0.82
Rom1P32958 Gm6888-201ENSMUST00000221983 706 ntBASIC9.94□□□□□ -0.82
Rom1P32958 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.94□□□□□ -0.82
Rom1P32958 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Rom1P32958 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.94□□□□□ -0.82
Rom1P32958 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.93□□□□□ -0.82
Rom1P32958 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Rom1P32958 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Rom1P32958 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.93□□□□□ -0.82
Rom1P32958 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.93□□□□□ -0.82
Rom1P32958 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Rom1P32958 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.93□□□□□ -0.82
Rom1P32958 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.93□□□□□ -0.82
Rom1P32958 Gm44069-201ENSMUST00000204898 506 ntBASIC9.93□□□□□ -0.82
Rom1P32958 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.93□□□□□ -0.82
Rom1P32958 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.93□□□□□ -0.82
Rom1P32958 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.93□□□□□ -0.82
Rom1P32958 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rom1P32958 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rom1P32958 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.93□□□□□ -0.82
Rom1P32958 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rom1P32958 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rom1P32958 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rom1P32958 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Rom1P32958 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Rom1P32958 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.92□□□□□ -0.82
Rom1P32958 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Rom1P32958 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.92□□□□□ -0.82
Rom1P32958 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms