Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm9522-201ENSMUST00000182394 926 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm28760-201ENSMUST00000185995 736 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm21470-201ENSMUST00000187680 696 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm10766-202ENSMUST00000194123 606 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Slc6a1P31648 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm9797-201ENSMUST00000052902 613 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc6a1P31648 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.84□□□□□ -0.67
Slc6a1P31648 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc6a1P31648 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Slc6a1P31648 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm18018-201ENSMUST00000198273 408 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms