Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.43□□□□□ -0.58
VtnP29788 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.43□□□□□ -0.58
VtnP29788 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.43□□□□□ -0.58
VtnP29788 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VtnP29788 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.43□□□□□ -0.58
VtnP29788 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
VtnP29788 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.43□□□□□ -0.58
VtnP29788 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
VtnP29788 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VtnP29788 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VtnP29788 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Gm6023-201ENSMUST00000118217 606 ntBASIC11.42□□□□□ -0.58
VtnP29788 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.42□□□□□ -0.58
VtnP29788 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.42□□□□□ -0.58
VtnP29788 Gm16296-201ENSMUST00000159905 325 ntBASIC11.42□□□□□ -0.58
VtnP29788 Gm2991-201ENSMUST00000173338 480 ntBASIC11.42□□□□□ -0.58
VtnP29788 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VtnP29788 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Gm6621-201ENSMUST00000193251 772 ntBASIC11.42□□□□□ -0.58
VtnP29788 Gm5904-201ENSMUST00000210286 865 ntBASIC11.42□□□□□ -0.58
VtnP29788 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
VtnP29788 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.42□□□□□ -0.58
VtnP29788 Gm5781-201ENSMUST00000219792 443 ntBASIC11.42□□□□□ -0.58
VtnP29788 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.42□□□□□ -0.58
VtnP29788 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.42□□□□□ -0.58
VtnP29788 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.42□□□□□ -0.58
VtnP29788 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.42□□□□□ -0.58
VtnP29788 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VtnP29788 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.42□□□□□ -0.58
VtnP29788 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
VtnP29788 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.42□□□□□ -0.58
VtnP29788 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
VtnP29788 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
VtnP29788 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.42□□□□□ -0.58
VtnP29788 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VtnP29788 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.41□□□□□ -0.58
VtnP29788 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Gm22323-201ENSMUST00000103832 109 ntBASIC11.41□□□□□ -0.58
VtnP29788 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.41□□□□□ -0.58
VtnP29788 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.41□□□□□ -0.58
VtnP29788 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.41□□□□□ -0.58
VtnP29788 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.41□□□□□ -0.58
VtnP29788 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VtnP29788 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
VtnP29788 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.41□□□□□ -0.58
VtnP29788 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VtnP29788 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms