Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nedd8P29595 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
Nedd8P29595 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nedd8P29595 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nedd8P29595 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nedd8P29595 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nedd8P29595 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.58□□□□□ -0.56
Nedd8P29595 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nedd8P29595 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nedd8P29595 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Nedd8P29595 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.58□□□□□ -0.56
Nedd8P29595 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.58□□□□□ -0.56
Nedd8P29595 Mir8117-201ENSMUST00000184773 107 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.58□□□□□ -0.56
Nedd8P29595 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 Psmb5-202ENSMUST00000227257 622 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nedd8P29595 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nedd8P29595 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.58□□□□□ -0.56
Nedd8P29595 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nedd8P29595 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.57□□□□□ -0.56
Nedd8P29595 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nedd8P29595 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nedd8P29595 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Gm15653-201ENSMUST00000119247 907 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Gm9103-201ENSMUST00000119371 405 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Gm13813-201ENSMUST00000120998 787 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Gm9727-201ENSMUST00000161387 555 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Gm38144-201ENSMUST00000192790 465 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.57□□□□□ -0.56
Nedd8P29595 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.57□□□□□ -0.56
Nedd8P29595 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Nedd8P29595 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nedd8P29595 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms