Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.41□□□□□ -0.1
Vcam1P29533 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vcam1P29533 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Vcam1P29533 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vcam1P29533 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.4□□□□□ -0.1
Vcam1P29533 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
Vcam1P29533 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Vcam1P29533 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Vcam1P29533 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Vcam1P29533 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.4□□□□□ -0.1
Vcam1P29533 Gm28071-201ENSMUST00000190355 478 ntBASIC14.4□□□□□ -0.1
Vcam1P29533 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Vcam1P29533 Gm5369-201ENSMUST00000217499 588 ntBASIC14.4□□□□□ -0.1
Vcam1P29533 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.4□□□□□ -0.1
Vcam1P29533 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.4□□□□□ -0.1
Vcam1P29533 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcam1P29533 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Vcam1P29533 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vcam1P29533 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.39□□□□□ -0.11
Vcam1P29533 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Gm5455-201ENSMUST00000058710 715 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vcam1P29533 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.39□□□□□ -0.11
Vcam1P29533 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcam1P29533 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Gm22133-201ENSMUST00000102082 109 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Gm14263-201ENSMUST00000117955 746 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 Gm11450-201ENSMUST00000121144 333 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.38□□□□□ -0.11
Vcam1P29533 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.38□□□□□ -0.11
Vcam1P29533 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 Gm5523-201ENSMUST00000180415 997 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Gm8959-201ENSMUST00000213150 571 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms