Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Gm26956-201ENSMUST00000182176 986 ntBASIC10.49□□□□□ -0.73
Col8a2P25318 Gm31256-201ENSMUST00000194705 506 ntBASIC10.49□□□□□ -0.73
Col8a2P25318 Gm44967-201ENSMUST00000207047 631 ntBASIC10.49□□□□□ -0.73
Col8a2P25318 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.49□□□□□ -0.73
Col8a2P25318 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Col8a2P25318 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.49□□□□□ -0.73
Col8a2P25318 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.49□□□□□ -0.73
Col8a2P25318 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.48□□□□□ -0.73
Col8a2P25318 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Gm14921-201ENSMUST00000118643 908 ntBASIC10.48□□□□□ -0.73
Col8a2P25318 Gm14726-201ENSMUST00000120623 896 ntBASIC10.48□□□□□ -0.73
Col8a2P25318 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.48□□□□□ -0.73
Col8a2P25318 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.48□□□□□ -0.73
Col8a2P25318 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.48□□□□□ -0.73
Col8a2P25318 Gm27320-201ENSMUST00000184892 109 ntBASIC10.48□□□□□ -0.73
Col8a2P25318 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.48□□□□□ -0.73
Col8a2P25318 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Col8a2P25318 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Col8a2P25318 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Col8a2P25318 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms