Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12624-201ENSMUST00000177615 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12621-201ENSMUST00000177760 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12615-201ENSMUST00000177970 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12622-201ENSMUST00000177975 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12627-201ENSMUST00000178412 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12625-201ENSMUST00000179122 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12614-201ENSMUST00000179586 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm12613-201ENSMUST00000180323 382 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Gm5455-201ENSMUST00000058710 715 ntBASIC12.98□□□□□ -0.33
Hoxd8P23463 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxd8P23463 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxd8P23463 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxd8P23463 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxd8P23463 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Hoxd8P23463 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxd8P23463 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxd8P23463 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.97□□□□□ -0.33
Hoxd8P23463 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm15515-201ENSMUST00000117827 822 ntBASIC12.97□□□□□ -0.33
Hoxd8P23463 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm44100-201ENSMUST00000204329 436 ntBASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.97□□□□□ -0.33
Hoxd8P23463 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.97□□□□□ -0.33
Hoxd8P23463 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxd8P23463 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxd8P23463 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.96□□□□□ -0.33
Hoxd8P23463 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.96□□□□□ -0.33
Hoxd8P23463 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Hoxd8P23463 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.96□□□□□ -0.33
Hoxd8P23463 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxd8P23463 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Gm5369-201ENSMUST00000217499 588 ntBASIC12.96□□□□□ -0.33
Hoxd8P23463 Gm35638-201ENSMUST00000220724 652 ntBASIC12.96□□□□□ -0.33
Hoxd8P23463 CT009754.4-201ENSMUST00000221430 565 ntBASIC12.96□□□□□ -0.33
Hoxd8P23463 Spcs1-203ENSMUST00000226374 592 ntBASIC12.96□□□□□ -0.33
Hoxd8P23463 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hoxd8P23463 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxd8P23463 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms