Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pde6bP23440 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.78□□□□□ -0.2
Pde6bP23440 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.78□□□□□ -0.2
Pde6bP23440 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pde6bP23440 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pde6bP23440 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pde6bP23440 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Pde6bP23440 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pde6bP23440 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Gm13875-201ENSMUST00000120162 282 ntBASIC13.77□□□□□ -0.21
Pde6bP23440 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.77□□□□□ -0.21
Pde6bP23440 Gm2260-201ENSMUST00000184965 657 ntBASIC13.77□□□□□ -0.21
Pde6bP23440 Gm44405-201ENSMUST00000198952 126 ntBASIC13.77□□□□□ -0.21
Pde6bP23440 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pde6bP23440 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pde6bP23440 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pde6bP23440 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pde6bP23440 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pde6bP23440 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
Pde6bP23440 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.76□□□□□ -0.21
Pde6bP23440 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Pde6bP23440 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.76□□□□□ -0.21
Pde6bP23440 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Gm13665-201ENSMUST00000120830 528 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Gm12291-201ENSMUST00000121627 311 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.76□□□□□ -0.21
Pde6bP23440 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pde6bP23440 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 AA914427-201ENSMUST00000193194 1166 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Gm43138-201ENSMUST00000199123 708 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.76□□□□□ -0.21
Pde6bP23440 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.76□□□□□ -0.21
Pde6bP23440 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.76□□□□□ -0.21
Pde6bP23440 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pde6bP23440 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Pde6bP23440 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.75□□□□□ -0.21
Pde6bP23440 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pde6bP23440 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pde6bP23440 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pde6bP23440 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms