Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Clk1P22518 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.82□□□□□ -0.52
Clk1P22518 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Gm11803-201ENSMUST00000119966 444 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.82□□□□□ -0.52
Clk1P22518 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Gm8652-201ENSMUST00000181363 964 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Gm29649-201ENSMUST00000185649 419 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Gm28693-202ENSMUST00000190758 331 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Gm6458-201ENSMUST00000211573 635 ntBASIC11.82□□□□□ -0.52
Clk1P22518 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.82□□□□□ -0.52
Clk1P22518 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.82□□□□□ -0.52
Clk1P22518 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.81□□□□□ -0.52
Clk1P22518 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Mir686-201ENSMUST00000102174 109 ntBASIC11.81□□□□□ -0.52
Clk1P22518 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clk1P22518 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.81□□□□□ -0.52
Clk1P22518 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Clk1P22518 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Gm8810-201ENSMUST00000172895 754 ntBASIC11.81□□□□□ -0.52
Clk1P22518 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.81□□□□□ -0.52
Clk1P22518 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.81□□□□□ -0.52
Clk1P22518 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.81□□□□□ -0.52
Clk1P22518 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clk1P22518 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clk1P22518 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clk1P22518 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.8□□□□□ -0.52
Clk1P22518 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clk1P22518 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms