Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Gm27023-201ENSMUST00000182372 285 ntBASIC16.11■□□□□ 0.17
Prim1P20664 Gm9022-201ENSMUST00000182482 992 ntBASIC16.11■□□□□ 0.17
Prim1P20664 Mir7070-201ENSMUST00000183657 86 ntBASIC16.11■□□□□ 0.17
Prim1P20664 Gm2260-201ENSMUST00000184965 657 ntBASIC16.11■□□□□ 0.17
Prim1P20664 AC165260.5-201ENSMUST00000224640 1247 ntBASIC16.11■□□□□ 0.17
Prim1P20664 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.11■□□□□ 0.17
Prim1P20664 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prim1P20664 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prim1P20664 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prim1P20664 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.11■□□□□ 0.17
Prim1P20664 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.1■□□□□ 0.17
Prim1P20664 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Prim1P20664 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Prim1P20664 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.1■□□□□ 0.17
Prim1P20664 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.1■□□□□ 0.17
Prim1P20664 Gzmn-202ENSMUST00000225535 989 ntBASIC16.1■□□□□ 0.17
Prim1P20664 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Prim1P20664 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC16.1■□□□□ 0.17
Prim1P20664 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.1■□□□□ 0.17
Prim1P20664 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prim1P20664 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.1■□□□□ 0.17
Prim1P20664 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.1■□□□□ 0.17
Prim1P20664 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.1■□□□□ 0.17
Prim1P20664 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.09■□□□□ 0.17
Prim1P20664 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Prim1P20664 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Rmrp-201ENSMUST00000157463 271 ntBASIC16.09■□□□□ 0.17
Prim1P20664 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Prim1P20664 Gm27341-201ENSMUST00000183570 106 ntBASIC16.09■□□□□ 0.17
Prim1P20664 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Gm18304-201ENSMUST00000189162 546 ntBASIC16.09■□□□□ 0.17
Prim1P20664 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.09■□□□□ 0.17
Prim1P20664 Zmym2-202ENSMUST00000223669 1281 ntBASIC16.09■□□□□ 0.17
Prim1P20664 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.09■□□□□ 0.17
Prim1P20664 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Prim1P20664 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prim1P20664 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Prim1P20664 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prim1P20664 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prim1P20664 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Prim1P20664 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms