Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm13342-201ENSMUST00000121055 207 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.04□□□□□ -0.48
Hoxb9P20615 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxb9P20615 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm37008-201ENSMUST00000195712 319 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm44405-201ENSMUST00000198952 126 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.04□□□□□ -0.48
Hoxb9P20615 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm39404-201ENSMUST00000216350 313 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm45925-201ENSMUST00000218882 744 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm25857-201ENSMUST00000082788 129 ntBASIC12.04□□□□□ -0.48
Hoxb9P20615 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxb9P20615 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxb9P20615 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm18304-201ENSMUST00000189162 546 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm37424-201ENSMUST00000191727 561 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm19309-201ENSMUST00000218295 205 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxb9P20615 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.03□□□□□ -0.48
Hoxb9P20615 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxb9P20615 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.02□□□□□ -0.48
Hoxb9P20615 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb9P20615 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb9P20615 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Hoxb9P20615 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Hoxb9P20615 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb9P20615 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.02□□□□□ -0.48
Hoxb9P20615 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxb9P20615 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxb9P20615 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb9P20615 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxb9P20615 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb9P20615 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxb9P20615 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxb9P20615 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms