Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Mir6956-201ENSMUST00000183598 62 ntBASIC11.49□□□□□ -0.57
Hmgn1P18608 Gm28631-201ENSMUST00000190740 334 ntBASIC11.49□□□□□ -0.57
Hmgn1P18608 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.49□□□□□ -0.57
Hmgn1P18608 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.49□□□□□ -0.57
Hmgn1P18608 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn1P18608 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.48□□□□□ -0.57
Hmgn1P18608 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Gm22121-201ENSMUST00000175148 54 ntBASIC11.48□□□□□ -0.57
Hmgn1P18608 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.48□□□□□ -0.57
Hmgn1P18608 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.48□□□□□ -0.57
Hmgn1P18608 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.48□□□□□ -0.57
Hmgn1P18608 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn1P18608 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.48□□□□□ -0.57
Hmgn1P18608 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Hmgn1P18608 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmgn1P18608 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn1P18608 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.47□□□□□ -0.57
Hmgn1P18608 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms