Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cntn1P12960 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cntn1P12960 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm12058-201ENSMUST00000118614 437 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 Gm14726-201ENSMUST00000120623 896 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm8018-201ENSMUST00000173536 789 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm31256-201ENSMUST00000194705 506 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.08□□□□□ -0.48
Cntn1P12960 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm6082-201ENSMUST00000215204 454 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cntn1P12960 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.08□□□□□ -0.48
Cntn1P12960 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.08□□□□□ -0.48
Cntn1P12960 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cntn1P12960 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn1P12960 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cntn1P12960 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.07□□□□□ -0.48
Cntn1P12960 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.07□□□□□ -0.48
Cntn1P12960 Gm4857-201ENSMUST00000192718 785 ntBASIC12.07□□□□□ -0.48
Cntn1P12960 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.07□□□□□ -0.48
Cntn1P12960 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cntn1P12960 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn1P12960 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cntn1P12960 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.06□□□□□ -0.48
Cntn1P12960 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cntn1P12960 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cntn1P12960 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms