Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.08□□□□□ -0.64
Ccl3P10855 Gm15782-201ENSMUST00000121073 445 ntBASIC11.08□□□□□ -0.64
Ccl3P10855 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccl3P10855 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.08□□□□□ -0.64
Ccl3P10855 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccl3P10855 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Gm19459-201ENSMUST00000176240 835 ntBASIC11.08□□□□□ -0.64
Ccl3P10855 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccl3P10855 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccl3P10855 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccl3P10855 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Ccl3P10855 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.08□□□□□ -0.64
Ccl3P10855 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.08□□□□□ -0.64
Ccl3P10855 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Ccl3P10855 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccl3P10855 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl3P10855 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ccl3P10855 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl3P10855 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm24231-201ENSMUST00000104315 133 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm12501-201ENSMUST00000119163 529 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm10051-201ENSMUST00000145209 414 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Mir7677-201ENSMUST00000184226 67 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.07□□□□□ -0.64
Ccl3P10855 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm44958-201ENSMUST00000203734 736 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Gm44545-201ENSMUST00000208262 746 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl3P10855 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm21811-201ENSMUST00000096485 930 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl3P10855 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl3P10855 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.07□□□□□ -0.64
Ccl3P10855 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms