Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Gm3332-201ENSMUST00000189337 928 ntBASIC16.21■□□□□ 0.19
Hoxc9P09633 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.21■□□□□ 0.19
Hoxc9P09633 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Gm1821-202ENSMUST00000227415 750 ntBASIC16.21■□□□□ 0.19
Hoxc9P09633 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hoxc9P09633 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.21■□□□□ 0.19
Hoxc9P09633 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc9P09633 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Hoxc9P09633 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxc9P09633 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.21■□□□□ 0.18
Hoxc9P09633 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxc9P09633 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Hoxc9P09633 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm11509-201ENSMUST00000117358 325 ntBASIC16.2■□□□□ 0.18
Hoxc9P09633 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Rprl1-201ENSMUST00000158050 327 ntBASIC16.2■□□□□ 0.18
Hoxc9P09633 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Mir6546-201ENSMUST00000184460 62 ntBASIC16.2■□□□□ 0.18
Hoxc9P09633 Ighv4-2-201ENSMUST00000192975 362 ntBASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm4607-201ENSMUST00000206649 577 ntBASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.2■□□□□ 0.18
Hoxc9P09633 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm26448-201ENSMUST00000082446 203 ntBASIC16.2■□□□□ 0.18
Hoxc9P09633 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Gm18227-201ENSMUST00000211082 1468 ntBASIC16.2■□□□□ 0.18
Hoxc9P09633 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxc9P09633 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Hoxc9P09633 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Gm15131-201ENSMUST00000119124 595 ntBASIC16.19■□□□□ 0.18
Hoxc9P09633 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Gm19459-201ENSMUST00000176240 835 ntBASIC16.19■□□□□ 0.18
Hoxc9P09633 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 CT571245.2-201ENSMUST00000218421 305 ntBASIC16.19■□□□□ 0.18
Hoxc9P09633 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Gm807-202ENSMUST00000224929 408 ntBASIC16.19■□□□□ 0.18
Hoxc9P09633 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxc9P09633 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxc9P09633 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC16.18■□□□□ 0.18
Hoxc9P09633 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms