Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa6P09092 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.9□□□□□ -0.66
Hoxa6P09092 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa6P09092 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa6P09092 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.9□□□□□ -0.66
Hoxa6P09092 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa6P09092 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa6P09092 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa6P09092 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa6P09092 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa6P09092 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa6P09092 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa6P09092 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.9□□□□□ -0.67
Hoxa6P09092 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa6P09092 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.89□□□□□ -0.67
Hoxa6P09092 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.89□□□□□ -0.67
Hoxa6P09092 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.89□□□□□ -0.67
Hoxa6P09092 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm11930-201ENSMUST00000117788 190 ntBASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm15808-201ENSMUST00000119046 604 ntBASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm2546-201ENSMUST00000182630 991 ntBASIC10.89□□□□□ -0.67
Hoxa6P09092 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.89□□□□□ -0.67
Hoxa6P09092 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.89□□□□□ -0.67
Hoxa6P09092 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hoxa6P09092 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa6P09092 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxa6P09092 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxa6P09092 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxa6P09092 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxa6P09092 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxa6P09092 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Gm11531-201ENSMUST00000117614 555 ntBASIC10.88□□□□□ -0.67
Hoxa6P09092 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.88□□□□□ -0.67
Hoxa6P09092 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxa6P09092 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms