Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TtrP07309 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TtrP07309 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TtrP07309 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TtrP07309 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TtrP07309 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TtrP07309 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
TtrP07309 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.1□□□□□ -0.95
TtrP07309 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.1□□□□□ -0.95
TtrP07309 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.1□□□□□ -0.95
TtrP07309 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.1□□□□□ -0.95
TtrP07309 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Gm13813-201ENSMUST00000120998 787 ntBASIC9.1□□□□□ -0.95
TtrP07309 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.1□□□□□ -0.95
TtrP07309 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.1□□□□□ -0.95
TtrP07309 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Gm20445-201ENSMUST00000061905 565 ntBASIC9.1□□□□□ -0.95
TtrP07309 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
TtrP07309 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
TtrP07309 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.1□□□□□ -0.95
TtrP07309 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.1□□□□□ -0.95
TtrP07309 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TtrP07309 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TtrP07309 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.09□□□□□ -0.95
TtrP07309 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.09□□□□□ -0.95
TtrP07309 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.09□□□□□ -0.95
TtrP07309 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.09□□□□□ -0.95
TtrP07309 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.09□□□□□ -0.95
TtrP07309 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Mir686-201ENSMUST00000102174 109 ntBASIC9.09□□□□□ -0.95
TtrP07309 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
TtrP07309 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
TtrP07309 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.09□□□□□ -0.95
TtrP07309 Gm16202-201ENSMUST00000117532 544 ntBASIC9.09□□□□□ -0.95
TtrP07309 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Gm26308-201ENSMUST00000157768 69 ntBASIC9.09□□□□□ -0.95
TtrP07309 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
TtrP07309 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TtrP07309 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.09□□□□□ -0.95
TtrP07309 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.09□□□□□ -0.95
TtrP07309 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms