Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Hoxa4P06798 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxa4P06798 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.39□□□□□ -0.43
Hoxa4P06798 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.39□□□□□ -0.43
Hoxa4P06798 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm14832-201ENSMUST00000121289 322 ntBASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm31256-201ENSMUST00000194705 506 ntBASIC12.39□□□□□ -0.43
Hoxa4P06798 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.39□□□□□ -0.43
Hoxa4P06798 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa4P06798 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa4P06798 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.38□□□□□ -0.43
Hoxa4P06798 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm11930-201ENSMUST00000117788 190 ntBASIC12.38□□□□□ -0.43
Hoxa4P06798 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxa4P06798 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm37259-201ENSMUST00000193903 849 ntBASIC12.38□□□□□ -0.43
Hoxa4P06798 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.38□□□□□ -0.43
Hoxa4P06798 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.38□□□□□ -0.43
Hoxa4P06798 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxa4P06798 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxa4P06798 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.38□□□□□ -0.43
Hoxa4P06798 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.37□□□□□ -0.43
Hoxa4P06798 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms