Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
P04224 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
P04224 Gm13453-201ENSMUST00000118708 357 ntBASIC11.07□□□□□ -0.64
P04224 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.07□□□□□ -0.64
P04224 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.07□□□□□ -0.64
P04224 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.07□□□□□ -0.64
P04224 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.07□□□□□ -0.64
P04224 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04224 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.07□□□□□ -0.64
P04224 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.06□□□□□ -0.64
P04224 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.06□□□□□ -0.64
P04224 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.06□□□□□ -0.64
P04224 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.06□□□□□ -0.64
P04224 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.06□□□□□ -0.64
P04224 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P04224 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.06□□□□□ -0.64
P04224 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.06□□□□□ -0.64
P04224 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.06□□□□□ -0.64
P04224 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.06□□□□□ -0.64
P04224 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P04224 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.06□□□□□ -0.64
P04224 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.06□□□□□ -0.64
P04224 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.06□□□□□ -0.64
P04224 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.06□□□□□ -0.64
P04224 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.06□□□□□ -0.64
P04224 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.06□□□□□ -0.64
P04224 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.06□□□□□ -0.64
P04224 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P04224 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P04224 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P04224 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.06□□□□□ -0.64
P04224 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
P04224 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.05□□□□□ -0.64
P04224 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.05□□□□□ -0.64
P04224 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
P04224 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 369.6 ms