Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm17837-201ENSMUST00000186435 985 ntBASIC10.51□□□□□ -0.73
CfdP03953 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Gm44333-201ENSMUST00000197168 107 ntBASIC10.51□□□□□ -0.73
CfdP03953 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Gm44069-201ENSMUST00000204898 506 ntBASIC10.51□□□□□ -0.73
CfdP03953 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.51□□□□□ -0.73
CfdP03953 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CfdP03953 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CfdP03953 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.51□□□□□ -0.73
CfdP03953 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.51□□□□□ -0.73
CfdP03953 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.51□□□□□ -0.73
CfdP03953 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
CfdP03953 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.51□□□□□ -0.73
CfdP03953 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
CfdP03953 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.5□□□□□ -0.73
CfdP03953 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.5□□□□□ -0.73
CfdP03953 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Gm13223-201ENSMUST00000118609 747 ntBASIC10.5□□□□□ -0.73
CfdP03953 Gm13689-201ENSMUST00000119360 685 ntBASIC10.5□□□□□ -0.73
CfdP03953 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.5□□□□□ -0.73
CfdP03953 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.5□□□□□ -0.73
CfdP03953 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.5□□□□□ -0.73
CfdP03953 AW822252-206ENSMUST00000208904 237 ntBASIC10.5□□□□□ -0.73
CfdP03953 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.5□□□□□ -0.73
CfdP03953 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.5□□□□□ -0.73
CfdP03953 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CfdP03953 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CfdP03953 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CfdP03953 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
CfdP03953 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.49□□□□□ -0.73
CfdP03953 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
CfdP03953 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Gm16202-201ENSMUST00000117532 544 ntBASIC10.49□□□□□ -0.73
CfdP03953 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CfdP03953 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.49□□□□□ -0.73
CfdP03953 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.49□□□□□ -0.73
CfdP03953 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.49□□□□□ -0.73
CfdP03953 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.49□□□□□ -0.73
CfdP03953 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.49□□□□□ -0.73
CfdP03953 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.49□□□□□ -0.73
CfdP03953 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CfdP03953 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CfdP03953 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CfdP03953 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms