Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hoxa3P02831 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hoxa3P02831 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.57□□□□□ -0.72
Hoxa3P02831 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hoxa3P02831 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Gm4857-201ENSMUST00000192718 785 ntBASIC10.57□□□□□ -0.72
Hoxa3P02831 Gm19931-201ENSMUST00000198920 368 ntBASIC10.57□□□□□ -0.72
Hoxa3P02831 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hoxa3P02831 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.57□□□□□ -0.72
Hoxa3P02831 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Hoxa3P02831 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Hoxa3P02831 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxa3P02831 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.56□□□□□ -0.72
Hoxa3P02831 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.56□□□□□ -0.72
Hoxa3P02831 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.56□□□□□ -0.72
Hoxa3P02831 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Hoxa3P02831 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Gm38092-201ENSMUST00000195600 653 ntBASIC10.56□□□□□ -0.72
Hoxa3P02831 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Gm21769-201ENSMUST00000211922 111 ntBASIC10.56□□□□□ -0.72
Hoxa3P02831 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxa3P02831 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.56□□□□□ -0.72
Hoxa3P02831 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxa3P02831 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxa3P02831 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxa3P02831 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxa3P02831 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms