Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm27243-201ENSMUST00000183964 521 ntBASIC11.38□□□□□ -0.59
P01808 Gm43630-201ENSMUST00000201550 776 ntBASIC11.38□□□□□ -0.59
P01808 Olfr284-202ENSMUST00000206647 966 ntBASIC11.38□□□□□ -0.59
P01808 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.38□□□□□ -0.59
P01808 Gm6013-201ENSMUST00000212264 699 ntBASIC11.38□□□□□ -0.59
P01808 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.38□□□□□ -0.59
P01808 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.38□□□□□ -0.59
P01808 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P01808 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P01808 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
P01808 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P01808 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.38□□□□□ -0.59
P01808 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P01808 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.38□□□□□ -0.59
P01808 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.38□□□□□ -0.59
P01808 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.38□□□□□ -0.59
P01808 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.38□□□□□ -0.59
P01808 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01808 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.37□□□□□ -0.59
P01808 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
P01808 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.37□□□□□ -0.59
P01808 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.37□□□□□ -0.59
P01808 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.37□□□□□ -0.59
P01808 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Gm10434-201ENSMUST00000101158 471 ntBASIC11.37□□□□□ -0.59
P01808 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.37□□□□□ -0.59
P01808 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
P01808 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Gm29396-201ENSMUST00000185659 716 ntBASIC11.37□□□□□ -0.59
P01808 Gm10608-202ENSMUST00000213924 676 ntBASIC11.37□□□□□ -0.59
P01808 Gm39404-201ENSMUST00000216350 313 ntBASIC11.37□□□□□ -0.59
P01808 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.37□□□□□ -0.59
P01808 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
P01808 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.37□□□□□ -0.59
P01808 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
P01808 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.37□□□□□ -0.59
P01808 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01808 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P01808 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P01808 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P01808 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
P01808 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P01808 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
P01808 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
P01808 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P01808 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.36□□□□□ -0.59
P01808 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.36□□□□□ -0.59
P01808 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
P01808 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P01808 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
P01808 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
P01808 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms