Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.61□□□□□ -0.71
Ifna1P01572 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Gm27390-201ENSMUST00000184516 176 ntBASIC10.61□□□□□ -0.71
Ifna1P01572 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.61□□□□□ -0.71
Ifna1P01572 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.61□□□□□ -0.71
Ifna1P01572 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Mir339-201ENSMUST00000083659 96 ntBASIC10.61□□□□□ -0.71
Ifna1P01572 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Ifna1P01572 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ifna1P01572 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ifna1P01572 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ifna1P01572 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ifna1P01572 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Gm5687-201ENSMUST00000118252 640 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 Gm12151-201ENSMUST00000121374 290 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 Gm14719-201ENSMUST00000121891 340 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.6□□□□□ -0.71
Ifna1P01572 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.6□□□□□ -0.71
Ifna1P01572 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ifna1P01572 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ifna1P01572 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.6□□□□□ -0.71
Ifna1P01572 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.6□□□□□ -0.71
Ifna1P01572 Gm19220-201ENSMUST00000222682 803 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.6□□□□□ -0.71
Ifna1P01572 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.6□□□□□ -0.71
Ifna1P01572 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.6□□□□□ -0.71
Ifna1P01572 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ifna1P01572 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ifna1P01572 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ifna1P01572 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ifna1P01572 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
Ifna1P01572 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ifna1P01572 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Ifna1P01572 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Gm22189-201ENSMUST00000103822 86 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Gm15321-201ENSMUST00000121290 288 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.59□□□□□ -0.71
Ifna1P01572 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.59□□□□□ -0.71
Ifna1P01572 Gm7063-201ENSMUST00000186840 981 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Gm37935-201ENSMUST00000192012 982 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Gm42612-201ENSMUST00000197986 623 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Gm43170-201ENSMUST00000199827 612 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Gm18307-201ENSMUST00000206864 949 ntBASIC10.59□□□□□ -0.71
Ifna1P01572 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ifna1P01572 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms