Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.97□□□□□ -0.33
CopeO89079 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Gm18624-201ENSMUST00000220966 658 ntBASIC12.97□□□□□ -0.33
CopeO89079 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.97□□□□□ -0.33
CopeO89079 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
CopeO89079 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.96□□□□□ -0.33
CopeO89079 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.96□□□□□ -0.33
CopeO89079 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Gm12928-201ENSMUST00000117115 573 ntBASIC12.96□□□□□ -0.33
CopeO89079 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.96□□□□□ -0.33
CopeO89079 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Gm10576-201ENSMUST00000191927 825 ntBASIC12.96□□□□□ -0.33
CopeO89079 Gm8099-201ENSMUST00000200510 742 ntBASIC12.96□□□□□ -0.33
CopeO89079 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CopeO89079 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CopeO89079 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CopeO89079 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CopeO89079 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.96□□□□□ -0.34
CopeO89079 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CopeO89079 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CopeO89079 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.95□□□□□ -0.34
CopeO89079 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CopeO89079 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.95□□□□□ -0.34
CopeO89079 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CopeO89079 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.95□□□□□ -0.34
CopeO89079 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Gm15920-201ENSMUST00000118998 402 ntBASIC12.95□□□□□ -0.34
CopeO89079 Gm14760-201ENSMUST00000121831 999 ntBASIC12.95□□□□□ -0.34
CopeO89079 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.95□□□□□ -0.34
CopeO89079 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.95□□□□□ -0.34
CopeO89079 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.95□□□□□ -0.34
CopeO89079 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Gm8227-201ENSMUST00000223306 571 ntBASIC12.95□□□□□ -0.34
CopeO89079 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.95□□□□□ -0.34
CopeO89079 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.95□□□□□ -0.34
CopeO89079 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.95□□□□□ -0.34
CopeO89079 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.95□□□□□ -0.34
CopeO89079 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CopeO89079 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CopeO89079 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CopeO89079 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.94□□□□□ -0.34
CopeO89079 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CopeO89079 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms