Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.01■□□□□ 0.15
Ubr1O70481 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ubr1O70481 Gm12419-201ENSMUST00000116649 636 ntBASIC16.01■□□□□ 0.15
Ubr1O70481 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC16.01■□□□□ 0.15
Ubr1O70481 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Mir7076-201ENSMUST00000183519 74 ntBASIC16.01■□□□□ 0.15
Ubr1O70481 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.01■□□□□ 0.15
Ubr1O70481 Gm43186-201ENSMUST00000198130 824 ntBASIC16.01■□□□□ 0.15
Ubr1O70481 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ubr1O70481 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.01■□□□□ 0.15
Ubr1O70481 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Gm12856-201ENSMUST00000119471 1293 ntBASIC16■□□□□ 0.15
Ubr1O70481 Gm15725-201ENSMUST00000119947 1090 ntBASIC16■□□□□ 0.15
Ubr1O70481 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC16■□□□□ 0.15
Ubr1O70481 Gm7666-201ENSMUST00000146631 819 ntBASIC16■□□□□ 0.15
Ubr1O70481 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC16■□□□□ 0.15
Ubr1O70481 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Gm21092-201ENSMUST00000178995 955 ntBASIC16■□□□□ 0.15
Ubr1O70481 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Snora73b-201ENSMUST00000083419 205 ntBASIC16■□□□□ 0.15
Ubr1O70481 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16■□□□□ 0.15
Ubr1O70481 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16■□□□□ 0.15
Ubr1O70481 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Gm15004-201ENSMUST00000119192 630 ntBASIC16■□□□□ 0.15
Ubr1O70481 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ubr1O70481 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC16■□□□□ 0.15
Ubr1O70481 Gm29499-201ENSMUST00000189151 486 ntBASIC16■□□□□ 0.15
Ubr1O70481 Gm28329-201ENSMUST00000191208 689 ntBASIC16■□□□□ 0.15
Ubr1O70481 Gm29171-201ENSMUST00000191397 486 ntBASIC16■□□□□ 0.15
Ubr1O70481 Gm18974-201ENSMUST00000221478 1031 ntBASIC16■□□□□ 0.15
Ubr1O70481 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC16■□□□□ 0.15
Ubr1O70481 CT030637.1-201ENSMUST00000228016 669 ntBASIC16■□□□□ 0.15
Ubr1O70481 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ubr1O70481 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ubr1O70481 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Ubr1O70481 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ubr1O70481 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
Ubr1O70481 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 Gm15566-201ENSMUST00000121130 590 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms