Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.47□□□□□ -0.41
Pdlim1O70400 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm13297-201ENSMUST00000120205 934 ntBASIC12.47□□□□□ -0.41
Pdlim1O70400 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.47□□□□□ -0.41
Pdlim1O70400 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.47□□□□□ -0.41
Pdlim1O70400 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.47□□□□□ -0.41
Pdlim1O70400 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.46□□□□□ -0.41
Pdlim1O70400 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm12314-201ENSMUST00000118104 538 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm13315-201ENSMUST00000120376 991 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm13342-201ENSMUST00000121055 207 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.46□□□□□ -0.41
Pdlim1O70400 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm9630-201ENSMUST00000178304 885 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm27501-201ENSMUST00000183599 107 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm37489-201ENSMUST00000191883 159 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm18935-201ENSMUST00000212692 664 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.46□□□□□ -0.41
Pdlim1O70400 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.46□□□□□ -0.41
Pdlim1O70400 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.46□□□□□ -0.41
Pdlim1O70400 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdlim1O70400 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pdlim1O70400 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.46□□□□□ -0.42
Pdlim1O70400 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdlim1O70400 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Pdlim1O70400 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.45□□□□□ -0.42
Pdlim1O70400 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.45□□□□□ -0.42
Pdlim1O70400 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Pdlim1O70400 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Mir1938-201ENSMUST00000158746 100 ntBASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm27023-201ENSMUST00000182372 285 ntBASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.45□□□□□ -0.42
Pdlim1O70400 Morn2-202ENSMUST00000227729 656 ntBASIC12.45□□□□□ -0.42
Pdlim1O70400 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdlim1O70400 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pdlim1O70400 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms